Functional Gene Pipeline and Repository FAQ
Select the tool you have questions about.
- FunGene General
- Pipeline Initial Process
- Mock Community Analysis
- Expand Mappings
- Representative Sequences
- Shannon & Chao1 Index
- Jaccard & Sørensen Index
How can I analyze a sequence set that exceeds the maximum number of sequences that can be entered in the web interface?
Please contact us for help running your data.
How do I use RDP FunGene for functional genes other than those listed?
We are relying heavily on experts of each gene family to contribute seed sequence designations for building the HMM models. If you have representative sequences and want to use fungene tools to process reads, let us know!