Index

A - B - C - D - E - F - G - H - I - J - K - L - M - N - O - P - Q - R - S - T - U - V - W - XYZ

Aligner (Infernal)

Complete Linkage Clustering

Chimera Removal

Command-line RDPTools with Phyloseq

Data Preprocessing

Defined Community Analysis

FASTA file format

FASTQ Tool

FrameBot (Frameshift correction)

Functional Gene Data

Generate OTU table (R-compatible community data matrix)

GitHub Repository (RDPstaff)

Initial Processing

Jaccard-Sørensen Index

Pipeline Initial Process

R Statistical Analysis

Sample Abundance Statistics

SFF file format

Shannon and Chao¹ Index

Sørensen Index

Workflows for 16S and functional gene data