Contents
Workflows:
Processing 16S rRNA data using a unsupervised method
Processing 16S rRNA data using a supervised method
Processing functional gene data using a supervised method
Individual tools:
Using the Pipeline Initial Process
Align 16S rRNA sequences using Infernal Aligner
Performing Complete Linkage Clustering
--Using the .clust File Results (for abundance stats, diversity stats, OTU matrix or rarefaction)
Performing statistical analysis (coming soon)
Align protein using HMMER3 Aligner
Frameshift-correction and closest match assignment by RDP FrameBot
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