RDP: Release 11

Library Compare - Start

 

Introduction

Use our library compare tool to do microbial community comparison based on 16S rRNA sequences. This tool uses the RDP naïve Bayesian classifier to provide rapid classification of library sequences into the new phylogenetically consistent higher-order bacterial taxonomy. It estimates the probability of observing the difference in a given taxon using a statistical test.

Help topics: Taxonomic Hierarchy Model and Comparison Algorithm

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(Files must be in Fasta, GenBank, or EMBL format)

Choose a gene: 16S rRNA training set 16 Fungal LSU training set 11 Warcup Fungal ITS trainset 2 UNITE Fungal ITS trainset 07-04-2014

Please enter your sequences from Library 1:

Choose a file to upload:

Please enter your sequences from Library 2:

Choose a file to upload:

 

   

 

 

Questions/comments: rdpstaff@msu.edu

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