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RDP Release 10, Update 21 :: July 14, 2010 :: 1,379,424  16S rRNAs

link to new window with RDP's latest NAR article

The Ribosomal Database Project (RDP) provides ribosome related data and services to the scientific community, including online data analysis and aligned and annotated Bacterial and Archaeal small-subunit 16S rRNA sequences.


RDP Release 10 brings two major changes to the RDP:

  • RDP10 provides new Bacterial and Archaeal alignments with several significant enhancements over the previous RDP 9 alignments.

  • Use of the Infernal secondary-structure based aligner that provides better support for short partial sequences and handles certain sequencing artifacts in a more intuitive manner.

Explore our online analysis tools:


HOVER over any tool item in the menu to see a brief popup description of its features;

CLICK on the tool menu item to begin working with it.

 

cameraIconBe sure to view the video tutorials and visit each tool's help file to use our site to your fullest advantage.




Sponsors:

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Support:


Part of the RDP's mission is to provide support to our users. Email and phone contacts are available on the contacts page.
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RDP News

07/27/2010  Pyro Site & News Service Interruptions Resolved
The problems some users were reporting with the pyro website and news feed (page timeouts, inaccessible for short periods of time) have been resolv...

07/19/2010  Pyro Site Service Interruptions
We have been monitoring a problem with the Pyro website where many users are experiencing slow responses and/or unable to access the site for brief...

07/14/2010  RDP 10, Update 21 Released
Release 10.21 contains 1,379,424 aligned 16S rRNA sequences.

07/02/2010  RDP Staff at ISMB in Boston
July 11-13, RDP poster on FrameBot and mcClust tools.

05/19/2010  RDP 10, Update 20 Released

05/04/2010  RDP attending ASM, May 23-27
RDP staff at San Diego ASM General Meeting

04/08/2010  RDP Workshop at MI-ASM Spring Meeting
RDP bioinformatics tools workshop, Sat., 4/10 Michigan ASM spring meeting

03/31/2010  RDP 10, Update 19 Released. Hierarchy model update
RDP 10, Update 19 Released. Minor updates on the Hierarchy model used by RDP. The hierarchy model used by RDP Classifier is updated to training set...

03/23/2010  Visit RDP poster at Michigan RNA Society Meeting
RDP Staff will be available to answer your questions during the poster session of the Michigan RNA Society meeting on Saturday, March 27th at Michi...

03/18/2010  New Fungene Release
Fugnene 2.0 has been released--access fungene at http://fungene.cme.msu.edu/